*** Latest News ***

CompuCell3D and SBW 11th User Training Workshop

August 9th—August 15th, 2015, Indiana University, Bloomington, IN, USA

We are pleased to announce our 11th User Training Workshop. The registration deadline is June 30th 2015. For more information please visit: CompuCell3D and SBW User Training Workshop

2015 Workshop Poster

IMPORTANT: We will host a one-day Workshop on Python Programming on Sunday, Aug 9th, 2015 that is designed to increase participants' familiarity with Python. This event is optional but if you feel you need to refresh your Python knowledge this is a good opportunity to to so.

Workshop Poster

New CompuCell3D 3.7.4 is released

Download here CompuCell3D 3.7.4 Download page

Welcome to CompuCell3D

CompuCell3D is an open-source simulation environment for multi-cell, single-cell-based modeling of tissues, organs and organisms.

It uses Cellular Potts Model to model cell behavior.

This project is funded by the NIH and EPA.

Compucell3D is led by Andy Somogyi (IU), James Glazier(IU) and Roshan D'Souza (U.Wisc. Milwaukee)

How to cite CompuCell3D

Multi-Scale Modeling of Tissues Using CompuCell3DM. Swat, Gilberto L. Thomas, Julio M. Belmonte, A. Shirinifard, D.Hmeljak, J. A. Glazier, Computational Methods in Cell Biology, Methods in Cell Biology 110: 325-366 (2012)

Job Opportunity

Asst/Assoc/Full Professor in Intelligent Systems Engineering

We are looking for outstanding researchers in both experimental and computational biology areas that apply to "Intelligent Systems Engineering" very broadly defined to include Computational Biology, Virtual Tissues, Tissue Engineering, Synthetic Biology, Toxicology, Computational Toxicology, Bioengineering, Biomedical Engineering, Biosensors, Organ-on-a-chip, etc.

Apply: https://indiana.peopleadmin.com/postings/1900

CompuCell3D Presentations from the conference Toward the 3D Virtual Cell - UC San Diego - Atkinson Hall, December 13-14, 2012.

New CompuCell Simulations have been published:

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